User profiles for S. Abbott
Sam AbbottLondon School of Hygiene and Tropical Medicine Verified email at lshtm.ac.uk Cited by 11406 |
[HTML][HTML] 16S rRNA gene sequencing for bacterial identification in the diagnostic laboratory: pluses, perils, and pitfalls
JM Janda, SL Abbott - Journal of clinical microbiology, 2007 - Am Soc Microbiol
The use of 16S rRNA gene sequences to study bacterial phylogeny and taxonomy has been
by far the most common housekeeping genetic marker used for a number of reasons. These …
by far the most common housekeeping genetic marker used for a number of reasons. These …
The Genus Aeromonas: Taxonomy, Pathogenicity, and Infection
JM Janda, SL Abbott - Clinical microbiology reviews, 2010 - Am Soc Microbiol
Over the past decade, the genus Aeromonas has undergone a number of significant changes
of practical importance to clinical microbiologists and scientists alike. In parallel with the …
of practical importance to clinical microbiologists and scientists alike. In parallel with the …
Evolving Concepts Regarding the Genus Aeromonas: An Expanding Panorama of Species, Disease Presentations, and Unanswered Questions
JM Janda, SL Abbott - Clinical Infectious Diseases, 1998 - academic.oup.com
… uted to Aeromonas have ever been reported and that Koch’s A. bestiarum … Janda and
Abbott [64] have proposed four major categories sampling periods. Similarly, volunteer studies …
Abbott [64] have proposed four major categories sampling periods. Similarly, volunteer studies …
[HTML][HTML] Comparative analysis of the risks of hospitalisation and death associated with SARS-CoV-2 omicron (B. 1.1. 529) and delta (B. 1.617. 2) variants in England: a …
… S-gene data were only used for test dates up to and including Dec 30, 2021, since … of
the S-gene positive BA.2 lineage of omicron reduced the positive predictive value of S-gene …
the S-gene positive BA.2 lineage of omicron reduced the positive predictive value of S-gene …
Estimated transmissibility and impact of SARS-CoV-2 lineage B. 1.1. 7 in England
… We calculated the weekly proportion of positive tests that were S gene–negative out of all
positive tests that tested for the S gene by English upper-tier local authority. We used …
positive tests that tested for the S gene by English upper-tier local authority. We used …
[HTML][HTML] Early dynamics of transmission and control of COVID-19: a mathematical modelling study
Background An outbreak of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
has led to 95 333 confirmed cases as of March 5, 2020. Understanding the early …
has led to 95 333 confirmed cases as of March 5, 2020. Understanding the early …
[HTML][HTML] Feasibility of controlling COVID-19 outbreaks by isolation of cases and contacts
Background Isolation of cases and contact tracing is used to control outbreaks of infectious
diseases, and has been used for coronavirus disease 2019 (COVID-19). Whether this …
diseases, and has been used for coronavirus disease 2019 (COVID-19). Whether this …
[HTML][HTML] The effect of control strategies to reduce social mixing on outcomes of the COVID-19 epidemic in Wuhan, China: a modelling study
…, CAB Pearson, JD Munday, S Abbott… - The lancet public …, 2020 - thelancet.com
… We divided the population according to the infection status into susceptible (S), exposed (E),
infected (I), and removed (R) individuals, and according to age into 5-year bands until age …
infected (I), and removed (R) individuals, and according to age into 5-year bands until age …
[HTML][HTML] Global, regional, and national estimates of the population at increased risk of severe COVID-19 due to underlying health conditions in 2020: a modelling study
…, S Abbott, CJ Villabona-Arenas, S Hué… - The Lancet Global …, 2020 - thelancet.com
Background The risk of severe COVID-19 if an individual becomes infected is known to be
higher in older individuals and those with underlying health conditions. Understanding the …
higher in older individuals and those with underlying health conditions. Understanding the …
[HTML][HTML] Effectiveness of isolation, testing, contact tracing, and physical distancing on reducing transmission of SARS-CoV-2 in different settings: a mathematical …
…, J Hellewell, S Clifford, CI Jarvis, S Abbott… - The Lancet infectious …, 2020 - thelancet.com
Background The isolation of symptomatic cases and tracing of contacts has been used as
an early COVID-19 containment measure in many countries, with additional physical …
an early COVID-19 containment measure in many countries, with additional physical …